SNP Profiles matching PA 88 [PER]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AG	GG	CT	CC	CT	TT	CC	AA	AG	CC	AG	CT	AA	CG
1._RUQ_1092	GG	GG	CT	_	_	TT	_	_	_	CC	AG	_	_	_
2._EET_400_[ECU]	AG	GG	CC	CC	TT	TT	CC	AA	GG	CC	AG	CT	AA	CG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	CC	GG	GG	AA	TT	CC	GG	GG	CT	CC	AA	GG	AA
1._RUQ_1092	_	CC	GG	GG	_	TT	CC	CG	GG	CT	AC	AA	_	AA
2._EET_400_[ECU]	TT	CC	GG	GG	AA	TT	CC	GG	TT	CC	AC	AA	GG	AA

	29	30	31	32	33	34	35
_Input profile	CC	AA	AC	GG	AC	AT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1092	CC	AG	AC	GG	AC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._EET_400_[ECU]	CC	AA	AC	GG	AC	AT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: PA_88_[PER]

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D677

Dapeng Zhang, 2016

1._SLA_16 RUQ_1092

90.9 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._EET_400_[ECU]

90 %
35 shared markers

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Malaysian Cocoa Board (MCB), Malaysia

Location: Plot85/Trial II 2B

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1484	2	TcSNP1458	3	TcSNP1442	4	TcSNP1350	5	TcSNP1270
6	TcSNP1253	7	TcSNP1165	8	TcSNP1075	9	TcSNP1062	10	TcSNP1060
11	TcSNP998	12	TcSNP994	13	TcSNP953	14	TcSNP929	15	TcSNP917
16	TcSNP891	17	TcSNP872	18	TcSNP723	19	TcSNP645	20	TcSNP619
21	TcSNP591	22	TcSNP577	23	TcSNP560	24	TcSNP534	25	TcSNP529
26	TcSNP469	27	TcSNP429	28	TcSNP372	29	TcSNP242	30	TcSNP230
31	TcSNP193	32	TcSNP150	33	TcSNP144	34	TcSNP32	35	TcSNP25